Structure Database (LMSD)

Common Name
Cer(d18:1/20:0)
Systematic Name
N-(eicosanoyl)-sphing-4-enine
Synonyms
  • C20 Cer
  • N-(eicosanoyl)-ceramide
  • N-(eicosanoyl)-ceramide
  • Cer[NS]
LM ID
LMSP02010007
Formula
C38H75NO3
Exact Mass
Calculate m/z
593.574694
Sum Composition
Cer 38:1;O2
Abbrev Chains
Cer 18:1;O2/20:0
Status
Active
Show lipids differing only in stereochemistry/bond geometry
Predict MS/MS spectrum ([M-H]-)

Classification

Category
Main Class
Sub Class
Sphingolipids [SP]
Ceramides [SP02]
N-acylsphingosines (ceramides) [SP0201]

Reactions

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Reactions graph legend

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Homo sapiens (#9606)
Mammalia (#40674)
Lipidomics reveals a remarkable diversity of lipids in human plasma,
J Lipid Res, 2010
Pubmed ID: 20671299
Mus musculus (#10090)
Mammalia (#40674)
Subcellular organelle lipidomics in TLR-4-activated macrophages.,
J Lipid Res, 2010
Pubmed ID: 20574076

String Representations

InChiKey (Click to copy)
XWBWIAOWSABHFI-NUKVNZTCSA-N
InChi (Click to copy)
InChI=1S/C38H75NO3/c1-3-5-7-9-11-13-15-17-18-19-20-22-24-26-28-30-32-34-38(42)39-36(35-40)37(41)33-31-29-27-25-23-21-16-14-12-10-8-6-4-2/h31,33,36-37,40-41H,3-30,32,34-35H2,1-2H3,(H,39,42)/b33-31+/t36-,37+/m0/s1
SMILES (Click to copy)
[C@](CO)([H])(NC(CCCCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC

Other Databases

HMDB ID
HMDB0004951
CHEBI ID
72962
PubChem CID
5283566
SwissLipids ID
SLM:000389557
Cayman ID
10724

Calculated Physicochemical Properties

Heavy Atoms 42
Rings 0
Aromatic Rings 0
Rotatable Bonds 34
Van der Waals Molecular Volume 698.05
Topological Polar Surface Area 69.56
Hydrogen Bond Donors 3
Hydrogen Bond Acceptors 3
logP 11.98
Molar Refractivity 185.54

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Updated at
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